In Photoshop add a new layer and fill it will;
Red - cyan
Green - magenta
Blue -yellow
Then change the blending mode to screen.
Merge each image and its colour layer the stack all the merged layers. Change the blending modes of the top 2 layers to multiply.
I never acomidated for the reduced exposure due to the filters so my image came out dull, with a exposure lay I managed to boost the colours to look realistic.
To understand how this works you need know the relationship between RGB and CKYM.
RGB comes from projected light by mixing the 3 colours you can produce white
CKYM comes from print by combining Cyan,Yellow and magenta you produce black
They are Also contrasting colours so the red filter only records the red shades on to the negative, when converted to positive the colour is also inverted giving Cyan.
I like how you have gone into depth about why you have to do certain things along with your notes being easy to follow. It is a shame the final image didn't come out as well as you hoped however you understand the technique and you will remember to compensate for the low exposure when using filters
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